File:GMRESm.f90: Difference between revisions

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=== The Method ===
FORTRAN: link above.


This implements the classic GMRES(m) method for solving the system \[A\vec{x}=\vec{b}\] for $\vec{x}$.  This implementation introduces the extra constraint $|\vec{x}|<\delta$, which may be ignored by putting $\delta$ large.
MATLAB / GNU Octave: [[File:GMRESm.m]]


The main advantage of the method is that it only requires calculations of multiplies by $A$ for a given $\vec{x}$ -- it does not need to know $A$ itself.  This means that $A$ need not even be stored, and could correspond to a very complex linear 'action' on $\vec{x}$, e.g. a time integral with initial condition $\vec{x}$.  The method seeks eigenvectors in $\mathrm{span}\{\vec{x},\,A\vec{x},\,A^2\vec{x},...\}$, but uses Gram-Schmidt orthogonalisation to improve the suitability of the basis.
== The GMRES(m) Method ==


The extra constraint means that restarts are not straight forwardm should be chosen sufficiently large to solve within the specified residual error, $|Ax-b|/|b|$<res.
This implements the classic GMRES(m) method for solving the system \[A\vec{x}=\vec{b}\] for $\vec{x}$This implementation minimises the error $\|A\vec{x}-\vec{b}\|$ subject to the additional constraint $\|\vec{x}\|<\delta$.  (This constraint may be ignored by supplying $\delta<0$ in the implementation.)


To download, click the link above.  The routine needs to be passed an external functions that calculates dot products, and two external subroutines, one that calculates the action of multiplication by $A$, and another that replaces a vector with the action of a preconditioner matrixThe latter may simply be an empty subroutine if no preconditioner is required.
The main advantage of the GMRES method is that it only requires calculations of multiplies by $A$ for a given $\vec{x}$ -- it does not need to know $A$ itself.  This means that $A$ need not even be stored, and could correspond to a very complex linear 'action' on $\vec{x}$, e.g. a time integral with initial condition $\vec{x}$.  For a given starting vector $\vec{x}_0$, the method seeks solutions for $\vec{x}$ in $\mathrm{span}\{\vec{x}_0,\,A\vec{x}_0,\,A^2\vec{x}_0,...\}$, but uses Gram-Schmidt orthogonalisation to improve the numerical suitability of this basis set.  The set of orthogonalised vectors is called the Krylov-subspace, and m is the maximum number of vectors stored.
 
Whereas m is traditionally a small number, e.g. 3 or 4, the additional constraint renders restarts difficult.  If the constraint is important, then m must be chosen sufficiently large to solve to the desired accuracy within m iterations.
 
'''Preconditioning'''. 
 
The implementations above can be supplied a preconditioner routine. (This can be avoided if combined with timestepping; see the remarks at [[File:Arnoldi.f]]). 
 
GMRES is likely to find it easier to solve $M^{-1}A\,x=M^{-1}b$ than the original system, if $M^{-1}$ is an approximate inverse for $A$.
For example, if $A$ is dominated by its diagonal elements, we might take $M$ to be the banded matrix consisting of the diagonal and the first sub- and super-diagonals of $A$.  Each GMRES iteration applied to the modified system now requires a muliplication by $A$ then by $M^{-1}$.  This is fine, as it is quick and easy to solve $Mx'=x$ for $x'$ for a banded matrix $M$.  Like $A$, we don't need to know the matrix $M^{-1}$ itself, only the result of multiplication by these matrices.
 
== The code ==
 
To download, click the link above.  The code uses the LAPACK package.
 
This constraint $\|\vec{x}\|<\delta$ may be ignored by supplying negative '<tt>del</tt>'.
 
In addition to scalar and array variables, the routine needs to be passed
* an external function that calculates dot products,
* an external subroutine that calculates the result of multiplication by $A$,
* an external subroutine that replaces a given vector $\vec{x}$ with the solution $\vec{x}'$ of the system $M\vec{x}'=\vec{x}$This may simply be an empty subroutine if no preconditioner is required, i.e. $M=I$.
 
The functions above may require auxiliary data in addition to $\vec{x}$ or $\vec{\delta x}$.  Place this data in a module and access via '<tt>use mymodule</tt>' in the function/subroutine.
 
== Parallel use ==
 
It is NOT necessary to edit this code for parallel (MPI) use:
* let each thread pass its subsection for the vector $\vec{x}$,
* make the dot product function <tt>mpi_allreduce</tt> the result of the dot product.
* to avoid multiple outputs to the terminal, set <tt>info=1</tt> on rank 0 and <tt>info=0</tt> for the other ranks.

Latest revision as of 07:28, 31 October 2019

$ \renewcommand{\vec}[1]{ {\bf #1} } \newcommand{\bnabla}{ \vec{\nabla} } \newcommand{\Rey}{Re} \def\vechat#1{ \hat{ \vec{#1} } } \def\mat#1{#1} $

FORTRAN: link above.

MATLAB / GNU Octave: File:GMRESm.m

The GMRES(m) Method

This implements the classic GMRES(m) method for solving the system \[A\vec{x}=\vec{b}\] for $\vec{x}$. This implementation minimises the error $\|A\vec{x}-\vec{b}\|$ subject to the additional constraint $\|\vec{x}\|<\delta$. (This constraint may be ignored by supplying $\delta<0$ in the implementation.)

The main advantage of the GMRES method is that it only requires calculations of multiplies by $A$ for a given $\vec{x}$ -- it does not need to know $A$ itself. This means that $A$ need not even be stored, and could correspond to a very complex linear 'action' on $\vec{x}$, e.g. a time integral with initial condition $\vec{x}$. For a given starting vector $\vec{x}_0$, the method seeks solutions for $\vec{x}$ in $\mathrm{span}\{\vec{x}_0,\,A\vec{x}_0,\,A^2\vec{x}_0,...\}$, but uses Gram-Schmidt orthogonalisation to improve the numerical suitability of this basis set. The set of orthogonalised vectors is called the Krylov-subspace, and m is the maximum number of vectors stored.

Whereas m is traditionally a small number, e.g. 3 or 4, the additional constraint renders restarts difficult. If the constraint is important, then m must be chosen sufficiently large to solve to the desired accuracy within m iterations.

Preconditioning.

The implementations above can be supplied a preconditioner routine. (This can be avoided if combined with timestepping; see the remarks at File:Arnoldi.f).

GMRES is likely to find it easier to solve $M^{-1}A\,x=M^{-1}b$ than the original system, if $M^{-1}$ is an approximate inverse for $A$. For example, if $A$ is dominated by its diagonal elements, we might take $M$ to be the banded matrix consisting of the diagonal and the first sub- and super-diagonals of $A$. Each GMRES iteration applied to the modified system now requires a muliplication by $A$ then by $M^{-1}$. This is fine, as it is quick and easy to solve $Mx'=x$ for $x'$ for a banded matrix $M$. Like $A$, we don't need to know the matrix $M^{-1}$ itself, only the result of multiplication by these matrices.

The code

To download, click the link above. The code uses the LAPACK package.

This constraint $\|\vec{x}\|<\delta$ may be ignored by supplying negative 'del'.

In addition to scalar and array variables, the routine needs to be passed

  • an external function that calculates dot products,
  • an external subroutine that calculates the result of multiplication by $A$,
  • an external subroutine that replaces a given vector $\vec{x}$ with the solution $\vec{x}'$ of the system $M\vec{x}'=\vec{x}$. This may simply be an empty subroutine if no preconditioner is required, i.e. $M=I$.

The functions above may require auxiliary data in addition to $\vec{x}$ or $\vec{\delta x}$. Place this data in a module and access via 'use mymodule' in the function/subroutine.

Parallel use

It is NOT necessary to edit this code for parallel (MPI) use:

  • let each thread pass its subsection for the vector $\vec{x}$,
  • make the dot product function mpi_allreduce the result of the dot product.
  • to avoid multiple outputs to the terminal, set info=1 on rank 0 and info=0 for the other ranks.

File history

Click on a date/time to view the file as it appeared at that time.

Date/TimeDimensionsUserComment
current04:48, 26 June 2019 (5 KB)Apwillis (talk | contribs)Minor edits in comments only.
04:30, 13 December 2016 (5 KB)Apwillis (talk | contribs)Solve Ax=b for x, subject to constraint |x|<delta.